BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033B10SP1|AL429695
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1468 1672 0.0
>3x_Contig1468
Length = 9852
Score = 1672 bits (843), Expect = 0.0
Identities = 852/856 (99%)
Strand = Plus / Minus
Query: 1 acacacgaaggaacatatgccgaggaattttatcctatagtgaamgcntgctctgataac 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5728 acacacgaaggaacatatgccgaggaattttatcctatagtgaaacgctgctctgataac 5669
Query: 61 tcggtgtttctacccaaaagtatcagcataagaggattgcgtttcttctatgacgctatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5668 tcggtgtttctacccaaaagtatcagcataagaggattgcgtttcttctatgacgctatc 5609
Query: 121 ttcttcaatcttccattgacagctcacttcggtctttatgttggtagcactaattttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5608 ttcttcaatcttccattgacagctcacttcggtctttatgttggtagcactaattttgac 5549
Query: 181 atttctttgagcagtattagcattttaaagaagttagcgactaaattggactcgggaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5548 atttctttgagcagtattagcattttaaagaagttagcgactaaattggactcgggaaat 5489
Query: 241 cctagaggtctccacaaaagtatattattgacggtattcgattctgttgatgattctgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5488 cctagaggtctccacaaaagtatattattgacggtattcgattctgttgatgattctgca 5429
Query: 301 agaataaaacaaagcttcattgatcaactaatgtcgcctattaccgatgaatgctcattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5428 agaataaaacaaagcttcattgatcaactaatgtcgcctattaccgatgaatgctcattg 5369
Query: 361 aaattaaaggtgaatattctagatttcattagcaaaaacttgtcttacacagatcacaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5368 aaattaaaggtgaatattctagatttcattagcaaaaacttgtcttacacagatcacaac 5309
Query: 421 accaccatatcacattttcttttagggtatcaagtgtcgaatactatttcattggggcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5308 accaccatatcacattttcttttagggtatcaagtgtcgaatactatttcattggggcca 5249
Query: 481 gaattagatacattcataaattctaagacttcgttacttcaaacaatcgtaaaccttatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5248 gaattagatacattcataaattctaagacttcgttacttcaaacaatcgtaaaccttatg 5189
Query: 541 atcgagtcactatcatgtattaacagtcttaatgttgaatatgctccaatgaggttatgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5188 atcgagtcactatcatgtattaacagtcttaatgttgaatatgctccaatgaggttatgt 5129
Query: 601 gcagaatttatggaaataattacaaagctttgccgtaatcctttgacatgcaaaataact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5128 gcagaatttatggaaataattacaaagctttgccgtaatcctttgacatgcaaaataact 5069
Query: 661 ttggattatctgtcaactctggatttagataaggttcttctaagcatggacccaaaggtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5068 ttggattatctgtcaactctggatttagataaggttcttctaagcatggacccaaaggtg 5009
Query: 721 tctgtgttgtctcattggaatggagagcctttcaacggagattttgacaagtacacctcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5008 tctgtgttgtctcattggaatggagagcctttcaacggagattttgacaagtacacctcg 4949
Query: 781 aaatttttaaactcgccagctatcggatctcttctttattttttgaaatatagaagtctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4948 aaatttttaaactcgccagctatcggatctcttctttattttttgaaatatagaagtctt 4889
Query: 841 ctaatgcaatttctaa 856
||||||||||||||||
Sbjct: 4888 ctaatgcaatttctaa 4873
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6949
Number of Sequences: 1807
Number of extensions: 6949
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)